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1.
Water Res ; 94: 62-72, 2016 May 01.
Artigo em Inglês | MEDLINE | ID: mdl-26925544

RESUMO

Microbial processes inevitably play a role in membrane-based desalination plants, mainly recognized as membrane biofouling. We assessed the bacterial community structure and diversity during different treatment steps in a full-scale seawater desalination plant producing 40,000 m(3)/d of drinking water. Water samples were taken over the full treatment train consisting of chlorination, spruce media and cartridge filters, de-chlorination, first and second pass reverse osmosis (RO) membranes and final chlorine dosage for drinking water distribution. The water samples were analyzed for water quality parameters (total bacterial cell number, total organic carbon, conductivity, pH, etc.) and microbial community composition by 16S rRNA gene pyrosequencing. The planktonic microbial community was dominated by Proteobacteria (48.6%) followed by Bacteroidetes (15%), Firmicutes (9.3%) and Cyanobacteria (4.9%). During the pretreatment step, the spruce media filter did not impact the bacterial community composition dominated by Proteobacteria. In contrast, the RO and final chlorination treatment steps reduced the Proteobacterial relative abundance in the produced water where Firmicutes constituted the most dominant bacterial group. Shannon and Chao1 diversity indices showed that bacterial species richness and diversity decreased during the seawater desalination process. The two-stage RO filtration strongly reduced the water conductivity (>99%), TOC concentration (98.5%) and total bacterial cell number (>99%), albeit some bacterial DNA was found in the water after RO filtration. About 0.25% of the total bacterial operational taxonomic units (OTUs) were present in all stages of the desalination plant: the seawater, the RO permeates and the chlorinated drinking water, suggesting that these bacterial strains can survive in different environments such as high/low salt concentration and with/without residual disinfectant. These bacterial strains were not caused by contamination during water sample filtration or from DNA extraction protocols. Control measurements for sample contamination are important for clean water studies.


Assuntos
Água Potável/microbiologia , Proteobactérias/isolamento & purificação , Água do Mar/microbiologia , Purificação da Água/métodos , Cloro/química , DNA Bacteriano/isolamento & purificação , Filtração , Membranas Artificiais , Osmose , RNA Ribossômico 16S/genética , Microbiologia da Água , Qualidade da Água
2.
Bioresour Technol ; 192: 131-41, 2015 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-26025351

RESUMO

In this study, the impact of COD/N ratio and feeding regime on the dynamics of heterotrophs and nitrifiers in moving-bed biofilm reactors was addressed. Based on DGGE analysis of 16S rRNA genes, the influent COD was found to be the main factor determining the overall bacterial diversity. The amoA-gene-based analysis suggested that the dynamic behavior of the substrate in continuous and pulse-feeding reactors influenced the selection of specific ammonium-oxidizing bacteria (AOB) strains. Furthermore, AOB diversity was directly related to the applied COD/N ratio and ammonium-nitrogen load. Maximum specific ammonium oxidation rates observed under non-substrate-limiting conditions were observed to be proportional to the fraction of nitrifiers within the bacterial community. FISH analysis revealed that Nitrosomonas genus dominated the AOB community in all reactors. Moreover, Nitrospira was found to be the only nitrite-oxidizing bacteria (NOB) in the fully autotrophic system, whereas Nitrobacter represented the dominant NOB genus in the organic carbon-fed reactors.


Assuntos
Reatores Biológicos/microbiologia , Nitrobacter/metabolismo , Nitrogênio/metabolismo , Nitrosomonas/metabolismo , Oxigênio/metabolismo , Compostos de Amônio/metabolismo , Biofilmes , Nitrificação/genética , Nitritos/metabolismo , Nitrobacter/genética , Nitrosomonas/genética , Oxirredução , RNA Ribossômico 16S/genética
3.
Extremophiles ; 17(3): 535-43, 2013 May.
Artigo em Inglês | MEDLINE | ID: mdl-23564266

RESUMO

Two obligately anaerobic sulfidogenic bacterial strains were isolated from the full-scale Thiopaq bioreactor in Lelystad (The Netherlands) removing H2S from biogas under oxygen-limiting and moderately haloalkaline conditions. Strain HSRB-L represents a dominant culturable sulfate-reducing bacterium in the reactor. It utilizes formate, H2 (with acetate as C-source) and lactate as e-donors, and sulfate, thiosulfate and sulfite as e-acceptors. It is haloalkalitolerant, with a pH range for lithotrophic growth from 7.5 to 9.7 (optimum at 8.5-9) and a salt range from 0.1 to 1.75 M total Na(+) (optimum at 0.6 M). The strain is a member of the genus Desulfonatronum and is proposed as a novel species D. alkalitolerans. The second strain, strain HTRB-L1, represents a dominant thiosulfate/sulfur reducer in the reactor. It is an obligate anaerobe utilizing formate and H2 (with acetate as C-source), lactate, pyruvate and fumarate as e-donors, and thiosulfate (incomplete reduction), sulfur, arsenate and fumarate as e-acceptors. With lactate as e-donor it also grows as an ammonifyer in the presence of nitrate and nitrite. HTRB-L1 is haloalkalitolerant, with a pH range for lithotrophic growth from 7.1 to 9.7 (optimum at 8.5) and a salt range from 0.6 to 1.5 M total Na(+) (optimum at 0.6 M). Phylogenetic analysis showed that strain HTRB-L1 is a novel species within the genus Sulfurospirillum (Epsilonproteobacteria) for which a name Sulfurospirillum alkalitolerans is proposed.


Assuntos
Reatores Biológicos/microbiologia , Deltaproteobacteria/isolamento & purificação , Epsilonproteobacteria/isolamento & purificação , Sequência de Bases , DNA Bacteriano/química , Deltaproteobacteria/genética , Deltaproteobacteria/metabolismo , Epsilonproteobacteria/genética , Epsilonproteobacteria/metabolismo , Dados de Sequência Molecular , Filogenia , Análise de Sequência de DNA , Enxofre/metabolismo
4.
Extremophiles ; 16(4): 597-605, 2012 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-22622646

RESUMO

An anaerobic enrichment culture inoculated with a sample of sediments from soda lakes of the Kulunda Steppe with elemental sulfur as electron acceptor and formate as electron donor at pH 10 and moderate salinity inoculated with sediments from soda lakes in Kulunda Steppe (Altai, Russia) resulted in the domination of a Gram-positive, spore-forming bacterium strain AHT28. The isolate is an obligate anaerobe capable of respiratory growth using elemental sulfur, thiosulfate (incomplete reduction) and arsenate as electron acceptor with H2, formate, pyruvate and lactate as electron donor. Growth was possible within a pH range from 9 to 10.5 (optimum at pH 10) and a salt concentration at pH 10 from 0.2 to 2 M total Na+ (optimum at 0.6 M). According to the phylogenetic analysis, strain AHT28 represents a deep independent lineage within the order Bacillales with a maximum of 90 % 16S rRNA gene similarity to its closest cultured representatives. On the basis of its distinct phenotype and phylogeny, the novel haloalkaliphilic anaerobe is suggested as a new genus and species, Desulfuribacillus alkaliarsenatis (type strain AHT28(T) = DSM24608(T) = UNIQEM U855(T)).


Assuntos
Bacillales , Lagos/microbiologia , Microbiologia da Água , Arseniatos/metabolismo , Bacillales/classificação , Bacillales/citologia , Bacillales/genética , Bacillales/isolamento & purificação , Bacillales/metabolismo , Sequência de Bases , Concentração de Íons de Hidrogênio , Dados de Sequência Molecular , Oxirredução , RNA Bacteriano/genética , RNA Ribossômico 16S/genética , Sibéria , Enxofre/metabolismo
5.
Extremophiles ; 16(3): 411-7, 2012 May.
Artigo em Inglês | MEDLINE | ID: mdl-22488572

RESUMO

Four strains of lithotrophic sulfate-reducing bacteria (SRB) have been enriched and isolated from anoxic sediments of hypersaline chloride-sulfate lakes in the Kulunda Steppe (Altai, Russia) at 2 M NaCl and pH 7.5. According to the 16S rRNA gene sequence analysis, the isolates were closely related to each other and belonged to the genus Desulfonatronovibrio, which, so far, included only obligately alkaliphilic members found exclusively in soda lakes. The isolates utilized formate, H(2) and pyruvate as electron donors and sulfate, sulfite and thiosulfate as electron acceptors. In contrast to the described species of the genus Desulfonatronovibrio, the salt lake isolates could only tolerate high pH (up to pH 9.4), while they grow optimally at a neutral pH. They belonged to the moderate halophiles growing between 0.2 and 2 M NaCl with an optimum at 0.5 M. On the basis of their distinct phenotype and phylogeny, the described halophilic SRB are proposed to form a novel species within the genus Desulfonatronovibrio, D. halophilus (type strain HTR1(T) = DSM24312(T) = UNIQEM U802(T)).


Assuntos
Deltaproteobacteria , Genes Bacterianos , Genes de RNAr , Filogenia , RNA Bacteriano/genética , RNA Ribossômico 16S/genética , Cloreto de Sódio/metabolismo , Ásia Central , Sequência de Bases , Deltaproteobacteria/classificação , Deltaproteobacteria/genética , Deltaproteobacteria/crescimento & desenvolvimento , Deltaproteobacteria/isolamento & purificação , Concentração de Íons de Hidrogênio , Lagos/microbiologia , Dados de Sequência Molecular , Microbiologia da Água
6.
Extremophiles ; 2012 Feb 01.
Artigo em Inglês | MEDLINE | ID: mdl-22294481

RESUMO

Anaerobic enrichments at pH 10, with pectin and polygalacturonates as substrates and inoculated with samples of sediments of hypersaline soda lakes from the Kulunda Steppe (Altai, Russia) demonstrated the potential for microbial pectin degradation up to soda-saturating conditions. The enrichments resulted in the isolation of six strains of obligately anaerobic fermentative bacteria, which represented a novel deep lineage within the order Clostridiales loosely associated with the family Lachnospiraceae. The isolates were rod-shaped and formed terminal round endospores. One of the striking features of the novel group is a very narrow substrate spectrum for growth, restricted to galacturonic acid and its polymers (e.g. pectin). Acetate and formate were the final fermentation products. Growth was possible in a pH range from 8 to 10.5, with an optimum at pH 9.5-10, and in a salinity range from 0.2 to 3.5 M Na(+). On the basis of unique phenotypic properties and distinct phylogeny, the pectinolytic isolates are proposed to be assigned to a new genus Natranaerovirga with two species N. hydrolytica (APP2(T)=DSM24176(T)=UNIQEM U806(T)) and N. pectinivora (AP3(T)=DSM24629(T)=UNIQEM U805(T)).

7.
Appl Environ Microbiol ; 77(22): 7942-53, 2011 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-21926194

RESUMO

The long- and short-term effects of salt on biological nitrogen and phosphorus removal processes were studied in an aerobic granular sludge reactor. The microbial community structure was investigated by PCR-denaturing gradient gel electrophoresis (DGGE) on 16S rRNA and amoA genes. PCR products obtained from genomic DNA and from rRNA after reverse transcription were compared to determine the presence of bacteria as well as the metabolically active fraction of bacteria. Fluorescence in situ hybridization (FISH) was used to validate the PCR-based results and to quantify the dominant bacterial populations. The results demonstrated that ammonium removal efficiency was not affected by salt concentrations up to 33 g/liter NaCl. Conversely, a high accumulation of nitrite was observed above 22 g/liter NaCl, which coincided with the disappearance of Nitrospira sp. Phosphorus removal was severely affected by gradual salt increase. No P release or uptake was observed at steady-state operation at 33 g/liter NaCl, exactly when the polyphosphate-accumulating organisms (PAOs), "Candidatus Accumulibacter phosphatis" bacteria, were no longer detected by PCR-DGGE or FISH. Batch experiments confirmed that P removal still could occur at 30 g/liter NaCl, but the long exposure of the biomass to this salinity level was detrimental for PAOs, which were outcompeted by glycogen-accumulating organisms (GAOs) in the bioreactor. GAOs became the dominant microorganisms at increasing salt concentrations, especially at 33 g/liter NaCl. In the comparative analysis of the diversity (DNA-derived pattern) and the activity (cDNA-derived pattern) of the microbial population, the highly metabolically active microorganisms were observed to be those related to ammonia (Nitrosomonas sp.) and phosphate removal ("Candidatus Accumulibacter").


Assuntos
Bactérias/efeitos dos fármacos , Bactérias/metabolismo , Biodiversidade , Consórcios Microbianos/efeitos dos fármacos , Esgotos/microbiologia , Cloreto de Sódio/metabolismo , Carga Bacteriana , Análise por Conglomerados , Impressões Digitais de DNA , DNA Bacteriano/química , DNA Bacteriano/genética , Eletroforese em Gel de Gradiente Desnaturante , Hibridização in Situ Fluorescente , Dados de Sequência Molecular , Nitrogênio/metabolismo , Oxirredutases/genética , Fósforo/metabolismo , Filogenia , Compostos de Amônio Quaternário/metabolismo , RNA Ribossômico 16S/genética , Análise de Sequência de DNA
8.
Extremophiles ; 15(6): 691-6, 2011 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-21915708

RESUMO

Anaerobic enrichment with pectin at pH 10 and moderate salinity inoculated with sediments from soda lakes of the Kulunda Steppe (Altai, Russia) resulted in the isolation of a novel member of the Bacteroidetes, strain AP1(T). The cells are long, flexible, Gram-negative rods forming pink carotenoids. The isolate is an obligate anaerobe, fermenting various carbohydrates to acetate and succinate. It can hydrolyze and utilize pectin, xylan, starch, laminarin and pullulan as growth substrates. Growth is possible in a pH range from 8 to 10.5, with an optimum at pH 9.5, and at a salinity range from 0.1 to 2 M Na(+). Phylogenetic analysis based on 16S rRNA sequences placed the isolate into the phylum Bacteroidetes as a separate lineage within the family Marinilabilaceae. On the basis of distinct phenotype and phylogeny, the soda lake isolate AP1(T) is proposed to be assigned in a new genus and species Natronoflexus pectinivorans (=DSM24179(T) = UNIQEM U807(T)).


Assuntos
Bacteroidetes/isolamento & purificação , Fermentação , Anaerobiose , Bacteroidetes/genética , Bacteroidetes/metabolismo , Hidrólise , Microscopia Eletrônica , Pectinas/metabolismo , Filogenia , RNA Ribossômico 16S/genética
9.
Extremophiles ; 15(3): 391-401, 2011 May.
Artigo em Inglês | MEDLINE | ID: mdl-21479878

RESUMO

Soda lake sediments usually contain high concentrations of sulfide indicating active sulfate reduction. Monitoring of sulfate-reducing bacteria (SRB) in soda lakes demonstrated a dominance of two groups of culturable SRB belonging to the order Desulfovibrionales specialized in utilization of inorganic electron donors, such as formate, H(2) and thiosulfate. The most interesting physiological trait of the novel haloalkaliphilic SRB isolates was their ability to grow lithotrophically by dismutation of thiosulfate and sulfite. All isolates were obligately alkaliphilic with a pH optimum at 9.5-10 and moderately salt tolerant. Among the fifteen newly isolated strains, four belonged to the genus Desulfonatronum and the others to the genus Desulfonatronovibrio. None of the isolates were closely related to previously described species of these genera. On the basis of phylogenetic, genotypic and phenotypic characterization of the novel soda lake SRB isolates, two novel species each in the genera Desulfonatronum and Desulfonatronovibrio are proposed.


Assuntos
Desulfovibrio/classificação , Microbiologia da Água , Água/química , Processos Autotróficos , Biodiversidade , Carbonatos/análise , Carbonatos/metabolismo , DNA Bacteriano/isolamento & purificação , Desulfovibrio/genética , Desulfovibrio/crescimento & desenvolvimento , Desulfovibrio/isolamento & purificação , Desulfovibrio/metabolismo , Sedimentos Geológicos/microbiologia , Concentração de Íons de Hidrogênio , Dados de Sequência Molecular , Oxirredução , Fenótipo , Filogenia , RNA Ribossômico 16S/genética , Ribotipagem , Federação Russa , Salinidade , Tolerância ao Sal , Sódio/metabolismo , Sulfetos/análise , Sulfetos/metabolismo , Sulfitos/metabolismo , Tiossulfatos/metabolismo
10.
Extremophiles ; 14(4): 349-55, 2010 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-20407798

RESUMO

Anaerobic enrichment cultures with elemental sulfur as electron acceptor and either acetate or propionate as electron donor and carbon source at pH 10 and moderate salinity inoculated with sediments from soda lakes in Kulunda Steppe (Altai, Russia) resulted in the isolation of two novel members of the bacterial phylum Chrysiogenetes. The isolates, AHT11 and AHT19, represent the first specialized obligate anaerobic dissimilatory sulfur respirers from soda lakes. They use either elemental sulfur/polysulfide or arsenate as electron acceptor and a few simple organic compounds as electron donor and carbon source. Elemental sulfur is reduced to sulfide through intermediate polysulfide, while arsenate is reduced to arsenite. The bacteria belong to the obligate haloalkaliphiles, with a pH growth optimum from 10 to 10.2 and a salt range from 0.2 to 3.0 M Na(+) (optimum 0.4-0.6 M). According to the phylogenetic analysis, the two strains were close to each other, but distinct from the nearest relative, the haloalkaliphilic sulfur-reducing bacterium Desulfurispirillum alkaliphilum, which was isolated from a bioreactor. On the basis of distinct phenotype and phylogeny, the soda lake isolates are proposed as a new genus and species, Desulfurispira natronophila (type strain AHT11(T) = DSM22071(T) = UNIQEM U758(T)).


Assuntos
Peptococcaceae/isolamento & purificação , Enxofre/metabolismo , Álcalis , Anaerobiose , Reatores Biológicos , Concentração de Íons de Hidrogênio , Oxirredução , Peptococcaceae/classificação , Peptococcaceae/crescimento & desenvolvimento , Peptococcaceae/metabolismo , Filogenia
11.
Extremophiles ; 14(1): 41-6, 2010 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-19779762

RESUMO

A possibility of dissimilatory MnO(2) reduction at extremely high salt and pH was studied in sediments from hypersaline alkaline lakes in Kulunda Steppe (Altai, Russia). Experiments with anaerobic sediment slurries demonstrated a relatively rapid reduction of colloidal MnO(2) in the presence of acetate and formate as electron donor at in situ conditions (i.e., pH 10 and a salt content from 0.6 to 4 M total Na(+)). All reduced Mn at these conditions remained in the solid phase. A single, stable enrichment culture was obtained from the slurries consistently reducing MnO(2) at pH 10 and 0.6 M total Na(+) with formate. A pure culture of a haloalkaliphilic Mn-reducing bacterium obtained from the positive enrichment was phylogenetically closely related to the anaerobic haloalkaliphilic Bacillus arseniciselenatis isolated from Mono Lake (CA, USA). Bacillus sp. strain AMnr1 was obligately anaerobic, able to grow either by glucose fermentation, or respiring few nonfermentable substrates by using MnO(2) as the electron acceptor. Optimal growth by dissimilatory MnO(2) reduction was achieved with glycerol as electron donor at pH 9.5-10 and salt content between 0.4 and 0.8 M total Na(+).


Assuntos
Bacillus/crescimento & desenvolvimento , Compostos de Manganês/metabolismo , Óxidos/metabolismo , Microbiologia da Água , Anaerobiose/genética , Anaerobiose/fisiologia , Bacillus/isolamento & purificação , Sequência de Bases , Concentração de Íons de Hidrogênio , Compostos de Manganês/química , Dados de Sequência Molecular , Óxidos/química , Filogenia , RNA Bacteriano/genética , RNA Ribossômico 16S/genética , Salinidade , Sibéria
12.
Extremophiles ; 14(1): 71-7, 2010 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-19888546

RESUMO

Evidence on the utilization of simple fatty acids by sulfate-reducing bacteria (SRB) at extremely haloalkaline conditions are practically absent, except for a single case of syntrophy by Desulfonatronum on acetate. Our experiments with sediments from soda lakes of Kulunda Steppe (Altai, Russia) showed sulfide production with sulfate as electron acceptor and propionate and butyrate (but not acetate) as an electron donor at a pH 10-10.5 and a salinity 70-180 g l(-1). With propionate as substrate, a highly enriched sulfidogenic culture was obtained in which the main component was identified as a novel representative of the family Syntrophobacteraceae. With butyrate as substrate, a pure SRB culture was isolated which oxidized butyrate and some higher fatty acids incompletely to acetate. The strain represents the first haloalkaliphilic representative of the family Desulfobacteraceae and is described as Desulfobotulus alkaliphilus sp. nov.


Assuntos
Butiratos/metabolismo , Deltaproteobacteria/crescimento & desenvolvimento , Propionatos/metabolismo , Sulfatos/metabolismo , Microbiologia da Água , Sequência de Bases , Butiratos/farmacologia , Deltaproteobacteria/genética , Deltaproteobacteria/isolamento & purificação , Deltaproteobacteria/metabolismo , Concentração de Íons de Hidrogênio , Dados de Sequência Molecular , Oxirredução , Propionatos/farmacologia , RNA Bacteriano/genética , RNA Ribossômico 16S/genética , Sibéria , Sulfatos/farmacologia
13.
Water Res ; 43(1): 182-94, 2009 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-18995879

RESUMO

In full-scale drinking water production from groundwater, subsurface aeration is an effective means of enhancing the often troublesome process of nitrification. Until now the exact mechanism, however, has been unknown. By studying the microbial population we can improve the understanding of this process. Denaturing gradient gel electrophoresis of PCR-amplified 16S rRNA gene fragments of bacteria, archaea and ammonia-oxidizing bacteria was used to characterize the microbial populations in raw groundwater and trickling filters of an active nitrifying surface aerated system and an inactive non-surface aerated system. Only in the active filter were nitrifying microorganisms found above the detection limit of the method. In ammonia oxidation in this groundwater filter both bacteria and archaea played a role, while members belonging to the genus Nitrospira were the only nitrite-oxidizing species found. The subsurface aerated groundwater did not contain any of the nitrifying organisms active in the filter above the detection limit, but did contain Gallionella species that might play a major role in iron oxidation in the filter.


Assuntos
Bactérias/metabolismo , Dióxido de Silício , Solo , Abastecimento de Água , DNA Arqueal/genética , Eletroforese em Gel de Ágar , Filtração , Nitrobacter/genética , Nitrobacter/isolamento & purificação , Nitrogênio/metabolismo , Filogenia , RNA Ribossômico 16S/genética , Análise de Sequência de DNA , Eliminação de Resíduos Líquidos , Purificação da Água
14.
Appl Microbiol Biotechnol ; 81(2): 371-8, 2008 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-18795282

RESUMO

An enrichment culture from saline soda soils, using acetate as carbon and energy source and 2-phenylpropionitrile as nitrogen source (PPN) at pH 10, resulted in the isolation of strain ANL-alpha CH3. The strain was identified as a representative of the genus Halomonas in the Gammaproteobacteria. The bacterium was capable of PPN utilization as a nitrogen source only, while phenylacetonitrile (PAN) served both as carbon, energy and nitrogen source. This capacity was not described previously for any other haloalkaliphilic bacteria. Apart from the nitriles mentioned above, resting cells of ANL-alpha CH3 also hydrolyzed mandelonitrile, benzonitrile, acrylonitrile, and phenylglycinonitrile, presumably using nitrilase pathway. Neither nitrile hydratase nor amidase activity was detected. The isolate showed a capacity to grow with benzoate and salicylate as carbon and energy source and demonstrated the ability to completely mineralize PAN. These clearly indicated a potential to catabolize aromatic compounds. On the basis of unique phenotype and distinct phylogeny, strain ANL-alpha CH3 is proposed as a novel species of the genus Halomonas--Halomonas nitrilicus sp. nov.


Assuntos
Acetonitrilas/metabolismo , Halomonas/classificação , Halomonas/metabolismo , Microbiologia do Solo , Ácido Acético/metabolismo , Acrilonitrila/metabolismo , Aminoidrolases/metabolismo , Ácido Benzoico/metabolismo , Carbono/metabolismo , Halomonas/genética , Halomonas/isolamento & purificação , Hidroliases/metabolismo , Concentração de Íons de Hidrogênio , Dados de Sequência Molecular , Nitrilas/metabolismo , Nitrogênio/metabolismo , Filogenia , RNA Ribossômico 16S/genética , Salicilatos/metabolismo
15.
Appl Microbiol Biotechnol ; 80(6): 965-75, 2008 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-18677474

RESUMO

Thiopaq biotechnology for partial sulfide oxidation to elemental sulfur is an efficient way to remove H(2)S from biogases. However, its application for high-pressure natural gas desulfurization needs upgrading. Particularly, an increase in alkalinity of the scrubbing liquid is required. Therefore, the feasibility of sulfide oxidation into elemental sulfur under oxygen limitation was tested at extremely haloalkaline conditions in lab-scale bioreactors using mix sediments from hypersaline soda lakes as inoculum. The microbiological analysis, both culture dependent and independent, of the successfully operating bioreactors revealed a domination of obligately chemolithoautotrophic and extremely haloalkaliphilic sulfur-oxidizing bacteria belonging to the genus Thioalkalivibrio. Two subgroups were recognized among the isolates. The subgroup enriched from the reactors operating at pH 10 clustered with Thioalkalivibrio jannaschii-Thioalkalivibrio versutus core group of the genus Thioalkalivibrio. Another subgroup, obtained mostly with sulfide as substrate and at lower pH, belonged to the cluster of facultatively alkaliphilic Thioalkalivibrio halophilus. Overall, the results clearly indicate a large potential of the genus Thiolalkalivibrio to efficiently oxidize sulfide at extremely haloalkaline conditions, which makes it suitable for application in the natural gas desulfurization.


Assuntos
Biodiversidade , Reatores Biológicos/microbiologia , Ectothiorhodospiraceae/classificação , Ectothiorhodospiraceae/genética , Sulfetos/metabolismo , Enxofre/metabolismo , DNA Bacteriano/química , DNA Bacteriano/genética , DNA Ribossômico/química , DNA Ribossômico/genética , Ectothiorhodospiraceae/isolamento & purificação , Genes de RNAr , Concentração de Íons de Hidrogênio , Dados de Sequência Molecular , Oxirredução , Filogenia , RNA Bacteriano/genética , RNA Ribossômico 16S/genética , Sais , Análise de Sequência de DNA , Homologia de Sequência do Ácido Nucleico
16.
Extremophiles ; 12(5): 619-25, 2008 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-18452025

RESUMO

In this paper we describe denitrification at extremely high salt and pH in sediments from hypersaline alkaline soda lakes and soda soils. Experiments with sediment slurries demonstrated the presence of acetate-utilizing denitrifying populations active at in situ conditions. Anaerobic enrichment cultures at pH 10 and 4 M total Na(+) with acetate as electron donor and nitrate, nitrite and N(2)O as electron acceptors resulted in the dominance of Gammaproteobacteria belonging to the genus Halomonas. Both mixed and pure culture studies identified nitrite and N(2)O reduction as rate-limiting steps in the denitrification process at extremely haloalkaline conditions.


Assuntos
Gammaproteobacteria/metabolismo , Sedimentos Geológicos/microbiologia , Nitratos/metabolismo , Acetatos/metabolismo , Anaerobiose , Gammaproteobacteria/genética , Gammaproteobacteria/isolamento & purificação , Concentração de Íons de Hidrogênio , Resíduos Industriais , Quênia , Dados de Sequência Molecular , Mongólia , Nitritos/metabolismo , Óxidos de Nitrogênio/metabolismo , RNA Bacteriano/genética , RNA Ribossômico 16S/genética , Sódio/metabolismo , Microbiologia da Água
17.
Extremophiles ; 12(3): 431-9, 2008 May.
Artigo em Inglês | MEDLINE | ID: mdl-18317684

RESUMO

Anaerobic enrichments with H2 as electron donor and thiosulfate/polysulfide as electron acceptor at pH 10 and 0.6 M total Na+ yielded two non sulfate-reducing representatives of reductive sulfur cycle from soda lake sediments. Strain AHT 1 was isolated with thiosulfate as the electron acceptor from north-eastern Mongolian soda lakes and strain AHT 2-with polysulfide as the electron acceptor from Wadi al Natrun lakes in Egypt. Both isolates represented new phylogenetic lineages: AHT 1-within Clostridiales and AHT 2-within the Deltaproteobacteria. Both bacteria are obligate anaerobes with respiratory metabolism. Both grew chemolithoautotrophically with H2 as the electron donor and can use thiosulfate, elemental sulfur and polysulfide as the electron acceptors. AHT 2 also used nitrate as acceptor, reducing it to ammonia. During thiosulfate reduction, AHT 1 excreted sulfite. dsrAB gene was not found in either strain. Both strains were moderate salt-tolerant (grow up to 2 M total Na+) true alkaliphiles (grow between pH 8.5 and 10.3). On the basis of the phenotypic and phylogenetic data, strains AHT 1 and AHT 2 are proposed as new genera and species Dethiobacter alkaliphilus and Desulfurivibrio alkaliphilus, respectively.


Assuntos
Bactérias/metabolismo , DNA Bacteriano/análise , Deltaproteobacteria/metabolismo , Água Doce/microbiologia , Sulfetos/metabolismo , Tiossulfatos/metabolismo , Adaptação Fisiológica , Amônia/metabolismo , Bactérias/classificação , Bactérias/genética , Bactérias/crescimento & desenvolvimento , Bactérias/isolamento & purificação , Crescimento Quimioautotrófico , Citocromos/metabolismo , Deltaproteobacteria/classificação , Deltaproteobacteria/genética , Deltaproteobacteria/crescimento & desenvolvimento , Deltaproteobacteria/isolamento & purificação , Egito , Ácidos Graxos/metabolismo , Água Doce/química , Concentração de Íons de Hidrogênio , Quênia , Dados de Sequência Molecular , Nitratos/metabolismo , Oxirredução , Fenótipo , Filogenia , RNA Bacteriano , RNA Ribossômico 16S , Salinidade , Fatores de Tempo
18.
J Appl Phycol ; 20(3): 227-235, 2008 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-19396356

RESUMO

Phototrophic biofilms occur on surfaces exposed to light in a range of terrestrial and aquatic environments. Oxygenic phototrophs like diatoms, green algae, and cyanobacteria are the major primary producers that generate energy and reduce carbon dioxide, providing the system with organic substrates and oxygen. Photosynthesis fuels processes and conversions in the total biofilm community, including the metabolism of heterotrophic organisms. A matrix of polymeric substances secreted by phototrophs and heterotrophs enhances the attachment of the biofilm community. This review discusses the actual and potential applications of phototrophic biofilms in wastewater treatment, bioremediation, fish-feed production, biohydrogen production, and soil improvement.

19.
Biotechnol Prog ; 24(6): 1278-89, 2008.
Artigo em Inglês | MEDLINE | ID: mdl-19194942

RESUMO

Continuous sulfate reduction at pH 4.0 was demonstrated in a pH controlled thermophilic (55 degrees C) upflow anaerobic sludge bed reactor fed with sucrose at a COD/SO(4)(2-) ratio of 0.9 and an organic loading rate of 0.8 and 1.9 gCOD (l(reactor) d)(-1) for a period of 78 days. A nearly complete sulfate reduction efficiency was achieved throughout the reactor run, corresponding to sulfate removal rates of 0.91 and 1.92 g (l(reactor) d)(-1) at sulfate loading rates of 0.94 and 2 g (l(reactor) d)(-1), respectively, by keeping the sulfide concentration below 20 mg l(-1) due to stripping with nitrogen gas. Acidification was always complete and acetate was the only degradation intermediate left in the effluent, which did not exceed 180 mgCOD l(-1) in pseudo-stationary states. The sludge was well retained in the reactor and kept its granular form. Zn, Cu, Se, and Mo accumulated in the sludge, whereas Co, Ni, Fe, and Mn leached from the sludge, despite their continuous supply to the reactor via the influent. The bacterial diversity in the reactor sludge at the end of the reactor run was low and the culture was dominated by one acidifying species, resembling Thermoanaerobacterium sp., and one sulfate reducing species, resembling Desulfotomaculum sp.


Assuntos
Reatores Biológicos , Temperatura Alta , Sacarose/metabolismo , Sulfatos/metabolismo , Concentração de Íons de Hidrogênio , Oxirredução , Sacarose/química , Sulfatos/química , Fatores de Tempo
20.
Microb Ecol ; 54(3): 578-85, 2007 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-17370028

RESUMO

Phototrophic biofilms are matrix-enclosed microbial communities, mainly driven by light energy. In this study, the successional changes in community composition of freshwater phototrophic biofilms growing on polycarbonate slides under different light intensities were investigated. The sequential changes in community composition during different developmental stages were examined by denaturing gradient gel electrophoresis (DGGE) of polymerase chain reaction (PCR)-amplified 16S rRNA gene fragments in conjugation with sequencing and phylogenetic analysis. Biofilm development was monitored with subsurface light sensors. The development of these biofilms was clearly light dependent. It was shown that under high light conditions the initial colonizers of the substratum predominantly consisted of green algae, whereas at low light intensities, heterotrophic bacteria were the initial colonizers. Cluster analysis of DGGE banding patterns revealed a clear correlation in the community structure with the developmental phases of the biofilms. At all light intensities, filamentous cyanobacteria affiliated to Microcoleus vaginatus became dominant as the biofilms matured. It was shown that the initial colonization phase of the phototrophic biofilms is shorter on polycarbonate surfaces precolonized by heterotrophic bacteria.


Assuntos
Biofilmes/crescimento & desenvolvimento , Cianobactérias/crescimento & desenvolvimento , Cianobactérias/genética , Biofilmes/efeitos da radiação , Análise por Conglomerados , Cianobactérias/classificação , Eletroforese/métodos , Luz , Dados de Sequência Molecular , Filogenia , Cimento de Policarboxilato/metabolismo , Reação em Cadeia da Polimerase , RNA Ribossômico 16S/genética , Análise de Sequência de DNA
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